Insertion junction: CLIP2.029096_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.029096
Chromosome:chromosome 2
Location:182419
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g074370 CDPK8 Calcium/calmodulin-dependent protein kinase; (1 of 18) K13412 - calcium-dependent protein kinase (CPK) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGGAAAGCATCCGGTGCCCGCTGATATGCAGTCTCTAAGGCAAACGATG
Internal bar code:GTACACGGAAGACGAGTCCGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:949
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:GGCCGGATCTTTCTCCAACA
Suggested primer 2:TGCATGTGTAGCTGCTGTGA