Insertion junction: CLIP2.029107_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.029107
Chromosome:chromosome 1
Location:3635485
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g023650 Probable amino acid/metabolite permease; (1 of 4) PTHR11785:SF367 - AMINO-ACID PERMEASE BAT1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATGCACGCACACGCACTCATTCTCTGTCATCCGAGCGACGCCAACGCAC
Internal bar code:AGCGTCTTCGGGGAGGTCCTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:198
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:GGACACCTCCCCCAAATCTG
Suggested primer 2:TCGTCATGCACAGCAGTCTT