Insertion junction: CLIP2.029107_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.029107
Chromosome:chromosome 1
Location:3635487
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g023650 Probable amino acid/metabolite permease; (1 of 4) PTHR11785:SF367 - AMINO-ACID PERMEASE BAT1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTGTCGCTGAGTCTCGCACGTGCACACACATACACACATACACACGTAC
Internal bar code:GGTCGGGGTTCTGAGCGTGGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1416
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:TCGTCATGCACAGCAGTCTT
Suggested primer 2:GGACACCTCCCCCAAATCTG