Insertion junction: CLIP2.029111_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.029111
Chromosome:chromosome 16
Location:5032326
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g686050 (1 of 1) PF05277 - Protein of unknown function (DUF726) (DUF726) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGAGACGATGGTACCGCCTCCGCCGCCGCCTCCGCACTGGCAGCCGCCG
Internal bar code:TAAGCGACTGATAAGAGGCAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:236
LEAP-Seq percent confirming:64.2857
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:ATGTGGTCATGTGGTGGCAA
Suggested primer 2:TCCTGCCACCACCATTACAC