Insertion junction: CLIP2.029120_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.029120
Chromosome:chromosome 2
Location:855032
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g078885 (1 of 2) PTHR10997//PTHR10997:SF7 - IMPORTIN-7, 8, 11 // IMPORTIN-11 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAACTAAGCCAAAAGCCAGAACCAGCCCAAAGAGCACAGGGGGCATGATG
Internal bar code:GACTGGCAATAAGAATAATTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:175
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:AATACCCATCCGCTGCTAGC
Suggested primer 2:CACGCGATACCTACCTCACC