Insertion junction: CLIP2.029129_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.029129
Chromosome:chromosome 1
Location:3147539
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g020100 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGGCGTCTGATTCATGGGCGTGGTGGGGCCCGTCAGCTGCGGGCTCAGA
Internal bar code:GTAATCTGGGAGTAAGCCATAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2479
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:AACAGCAGTTGCAGCAACAG
Suggested primer 2:AAAGGCTTCGGCTGCATTTG