Insertion junction: CLIP2.029131_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.029131
Chromosome:chromosome 4
Location:3900387
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g800501 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTCCATGTGTCGGGTCCCTAGATTTGCAGATGAGGAGCACCGGCCGCCG
Internal bar code:AGGTCGTTGGACAGAGAACGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:226
LEAP-Seq percent confirming:81.8182
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:ATGTAACCCTCCTCTCCCCC
Suggested primer 2:TTGAGTGGGACTGATGGCAC