Insertion junction: CLIP2.029132_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.029132
Chromosome:chromosome 1
Location:3910123
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g800074 (1 of 39) PTHR13078//PTHR13078:SF53 - FAMILY NOT NAMED // PROTEIN MAOC-1 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGGGAGCATGCGAATGTGGACATCACACGGAACCAGTTGTGGTTAGTAC
Internal bar code:GGGGTGAAAACTTTAGATGTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2222
LEAP-Seq percent confirming:67.8571
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:CAGTCATCTGCGCAATCGTG
Suggested primer 2:GGCAACCCAGCTTCAACTTG