Insertion junction: CLIP2.029134_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.029134
Chromosome:chromosome 12
Location:9477341
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g540650 (1 of 2) PTHR19241:SF62 - PROTEIN SCARLET intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACGCACGCACCTGGGGGTTGTGCGCGTCGAACTGCTCCACGTATCCCAT
Internal bar code:TCCTAATGTTTCAATTCTCACT

Confirmation - LEAP-Seq

LEAP-Seq distance:1120
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:CGGTGGTGTTTGCCTTTGAG
Suggested primer 2:GTACGGTCCGGATGCTGTAG