Insertion junction: CLIP2.029134_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.029134
Chromosome:chromosome 12
Location:9477348
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g540650 (1 of 2) PTHR19241:SF62 - PROTEIN SCARLET intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGCGTGTGGGTGTTTGAAACGCCGGAAACCGCACCTGGAGCCCCCTCCC
Internal bar code:TAGTTGCGCGGATAGGGCAATG

Confirmation - LEAP-Seq

LEAP-Seq distance:641
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:GTACGGTCCGGATGCTGTAG
Suggested primer 2:CGGTGGTGTTTGCCTTTGAG