Insertion junction: CLIP2.029136_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.029136
Chromosome:chromosome 3
Location:9114480
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g200879 CSR10 Carbohydrate sulfotransferase-related 10; (1 of 1) IPR000104//IPR000863//IPR012884//IPR027417 - Antifreeze protein, type I // Sulfotransferase domain // Excisionase-like // P-loop containing nucleoside triphosphate hydrolase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACCCTGCCGACACGTGGCGCCGCGACCCAGGCACCGCGAGTGAACTTGC
Internal bar code:ACGTAGCCGCTAGTCTCAAGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:934
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:32
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:CCGTCTTTCCCTTCGCTTCT
Suggested primer 2:CAAGGTTGTTGTCGCACAGG