Insertion junction: CLIP2.029139_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.029139
Chromosome:chromosome 16
Location:7366623
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g679781 (1 of 4) 2.1.1.127 - [Ribulose-bisphosphate carboxylase]-lysine N-methyltransferase / RuBisCO methyltransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGCTTGATCCGGCTAACGCCCGCGACGACTCCTTTTGACAGTTGGGACC
Internal bar code:AAGGCCGTCGTGGTCGGCGGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1667
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:TGCCCTTCCTGGATCTAGCT
Suggested primer 2:TGCTGTTTGGAGCCTGGTAG