Insertion junction: CLIP2.029140_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.029140
Chromosome:chromosome 7
Location:2349433
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g328250 Pumilio-family RNA binding protein; (1 of 2) K17943 - pumilio RNA-binding family (PUM) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCTGCCGCCACTGCCGCCGCCGCCGTTGTCGCCGCTACCCAGCTCAGAC
Internal bar code:ACCGGTTACCCGGGTAATTTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:3204
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:GCAATCCCAACCACCACAAC
Suggested primer 2:CTAGAGTGCGCAACAGGACA