Insertion junction: CLIP2.029156_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.029156
Chromosome:chromosome 17
Location:4519125
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g731466 (1 of 25) IPR000210//IPR011333 - BTB/POZ domain // POZ domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGGCGGTGGCGGCGGCGCCGGCCGCAGCGGGGCTGGCGTGCGAGGCGGC
Internal bar code:CGGGAGAACTGATACTATCATT

Confirmation - LEAP-Seq

LEAP-Seq distance:3540
LEAP-Seq percent confirming:98.1132
LEAP-Seq n confirming:52
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:53

Suggested primers for confirmation by PCR

Suggested primer 1:GTGGAAGGTGTAGTCCTGGC
Suggested primer 2:AGCAGTTCGACTTCCTGTGG