Insertion junction: CLIP2.029168_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.029168
Chromosome:chromosome 3
Location:3818587
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g169950 (1 of 1) PF02373//PF02375 - JmjC domain, hydroxylase (JmjC) // jmjN domain (JmjN) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGGTAGCGCCGCAGCGCGTCGGCAGCGTGCGGCAGCCAGTCGGCCGGTG
Internal bar code:GTTTGAAAGGTACGAGTACTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2680
LEAP-Seq percent confirming:78.7234
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:47

Suggested primers for confirmation by PCR

Suggested primer 1:AATGACTGCCCTCAGGAACG
Suggested primer 2:TCCACTACCAGTACCTCCCG