Insertion junction: CLIP2.029169_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.029169
Chromosome:chromosome 9
Location:3304046
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g395251 (1 of 80) IPR003882 - Pistil-specific extensin-like protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGACGGGGGCATTGGAGGAGAAGGCGGCGGCGATGGCGGCAGCGGCGGC
Internal bar code:AAATGAACTATATATAAAGTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:873
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:TCCATCTGCCTGTTCGTGAC
Suggested primer 2:GTAGACGCTGGTGAGGTAGC