Insertion junction: CLIP2.029169_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.029169
Chromosome:chromosome 9
Location:3304048
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g395251 (1 of 80) IPR003882 - Pistil-specific extensin-like protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCGCCGCCCTGGCCGCCAGGCACCATCCTGCCTCCGCCGCCGCCGGCAC
Internal bar code:AAATGAACTATATATAAAGTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:65
LEAP-Seq percent confirming:40.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:GTAGACGCTGGTGAGGTAGC
Suggested primer 2:TCCATCTGCCTGTTCGTGAC