Insertion junction: CLIP2.029170_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.029170
Chromosome:chromosome 16
Location:3161795
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g665300 (1 of 1) PTHR24006:SF329 - UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 44 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCAGGACCAGAGACTTGAGCCCGCGCGGGAGGTAGTGCGGGTGCACAGGC
Internal bar code:TTCAGGCACGTTTTCTACTAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:3128
LEAP-Seq percent confirming:98.0392
LEAP-Seq n confirming:50
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:51

Suggested primers for confirmation by PCR

Suggested primer 1:TATTCTCATTACCGCCCCGC
Suggested primer 2:CAGGCCTTGGGGAATAAGGG