Insertion junction: CLIP2.029174_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.029174
Chromosome:chromosome 2
Location:1438172
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g083550 (1 of 1) PF01494//PF05834 - FAD binding domain (FAD_binding_3) // Lycopene cyclase protein (Lycopene_cycl) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCATTACGCCACAACCACATCAACCACCGCCACCAATCCGCCGCCTCTG
Internal bar code:GGGGTGCGGGTGAACCGATCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1030
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:32
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:CGCCCGCTCATGTGTTAAAG
Suggested primer 2:TCAAGGCTGCTGGTTGCTTA