Insertion junction: CLIP2.029178_3

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.029178
Chromosome:chromosome 14
Location:3262727
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g801653 (1 of 16) PF02042 - RWP-RK domain (RWP-RK) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCTCGAGGCGAGCGTGACGGGGGATGGGCCCATAGCAGGCGCATGGTTT
Internal bar code:GCGCTTTCTAATATCACTGGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:2250
LEAP-Seq percent confirming:94.2857
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:ATCACTGCGTGTTGTCGACT
Suggested primer 2:ATCATCGTATCTGCCGGCTG