Insertion junction: CLIP2.029181_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.029181
Chromosome:chromosome 12
Location:3607271
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g801394 (1 of 8) IPR001163//IPR010920 - LSM domain, eukaryotic/archaea-type // LSM domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCCACACCCGTGGCATGAGGGGGCAGCTGTGCTGACTGAGGCATGACGC
Internal bar code:TCTGTACCACTACACCTAAAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1679
LEAP-Seq percent confirming:95.4545
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:CATCCCTCCCACACACTTCC
Suggested primer 2:AGTCCACAGACATGGCCATG