Insertion junction: CLIP2.029183_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.029183
Chromosome:chromosome 16
Location:60759
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g695851 (1 of 2) 2.1.1.229 - tRNA (carboxymethyluridine(34)-5-O)-methyltransferase / tRNA methyltransferase 9 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCCTCTAGCCACCACACCCCGTCGCCCGGACATGACTCCGGCAGCACGC
Internal bar code:TTTCGCGGTACTATCTACAAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1555
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:AACTCCTCGAGCCTTGCTTC
Suggested primer 2:CCAGCTTCCTACACCACCTG