Insertion junction: CLIP2.029193_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.029193
Chromosome:chromosome 3
Location:3080896
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g164150 (1 of 12) IPR003439//IPR003593//IPR027417 - ABC transporter-like // AAA+ ATPase domain // P-loop containing nucleoside triphosphate hydrolase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTCAAAGAGTGTGGAGGAGAGCGTGGCCTATGCCTGGGGAGGTGTGCAA
Internal bar code:GATACGCGGTGACTGACAGGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1889
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:37

Suggested primers for confirmation by PCR

Suggested primer 1:CAAGAAGGTGGTCAGCTCGT
Suggested primer 2:GCATAACCTGCGGCTAAAGC