Insertion junction: CLIP2.029201_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.029201
Chromosome:chromosome 8
Location:1510349
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g364862 (1 of 1) PF07714//PF13185 - Protein tyrosine kinase (Pkinase_Tyr) // GAF domain (GAF_2) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCACACCCTCGTGCCAGTACGACAGGTTTACCCGCACCCTCACAGGCTG
Internal bar code:AAACTACCATAGTTTGGTATAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1638
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:ACATGCGGGACACAGTTGAT
Suggested primer 2:ACAGCAGGAGGTGAATGGTG