Insertion junction: CLIP2.029210_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.029210
Chromosome:chromosome 1
Location:4593233
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g031700 FKM1 DNA methylase in the FkbM family; (1 of 13) PF05050 - Methyltransferase FkbM domain (Methyltransf_21) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGTGCTGCCGCCCAATGCCTTTCCATTCCCACGCTTATAGGTGAGCTCG
Internal bar code:GATGATGAGCCATGCGGGAGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:2243
LEAP-Seq percent confirming:94.7368
LEAP-Seq n confirming:36
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:CGGCATGCCTGAGTTAATGC
Suggested primer 2:GCACCTCCACCTTTCAGTGA