Insertion junction: CLIP2.029211_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.029211
Chromosome:chromosome 6
Location:7452524
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g300600 (1 of 19) PTHR31251:SF1 - SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 10-RELATED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGCGGCGGCTGGCCACAGCAGCAGCGGCCGCTGGGGCCGCTGCCAATGG
Internal bar code:ACGGGTACGTTGGTATTCACCC

Confirmation - LEAP-Seq

LEAP-Seq distance:2864
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:GACATGGGCTGATAGCTCCC
Suggested primer 2:CAATGTGGGTAGGGGGTGAC