Insertion junction: CLIP2.029216_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.029216
Chromosome:chromosome 13
Location:2624738
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g581000 GT90F26,GT90-26 GT90 family protein 26; (1 of 11) 2.4.2.26 - Protein xylosyltransferase / Uridine diphosphoxylose-protein xylosyltransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCCGCCGGCCAAGCGGGGTGTGCCGCTTGCCAACCACACCTACTTCAAG
Internal bar code:CTCACGTATTTAGCTAGTCAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2457
LEAP-Seq percent confirming:95.5556
LEAP-Seq n confirming:43
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:TTCCGCAACACCTCAGTACC
Suggested primer 2:ACGTCGGTGAGCACTTGAAT