Insertion junction: CLIP2.029221_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.029221
Chromosome:chromosome 12
Location:6020167
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g534550 PHR4 (1 of 1) PTHR11455:SF2 - BLUE-LIGHT PHOTORECEPTOR PHR2; Putative photolyase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCTCTTATGGATTTCATGCCCCGGATCGTCCAGCAGTTCGCACCTGCTC
Internal bar code:AAGCTGAATAAGGAGACGAATG

Confirmation - LEAP-Seq

LEAP-Seq distance:416
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:ACTTCCATCACCTGTGGCTG
Suggested primer 2:CATGTTGTGTCGCGAGTGTC