Insertion junction: CLIP2.029221_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.029221
Chromosome:chromosome 12
Location:6020178
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g534550 PHR4 (1 of 1) PTHR11455:SF2 - BLUE-LIGHT PHOTORECEPTOR PHR2; Putative photolyase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATGATGCCACCTGCTGGGGGAGCATGGCCTGGAGAACCTTCACACAAAG
Internal bar code:AAGCTGAATAAGGAGACGAATG

Confirmation - LEAP-Seq

LEAP-Seq distance:1604
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:CATGTTGTGTCGCGAGTGTC
Suggested primer 2:ACTTCCATCACCTGTGGCTG