Insertion junction: CLIP2.029226_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.029226
Chromosome:chromosome 17
Location:1407118
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g706200 (1 of 1) IPR006029//IPR006201 - Neurotransmitter-gated ion-channel transmembrane domain // Neurotransmitter-gated ion-channel CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGATGGGTTCCTGCTTCGCTCCAGCTGGGACTATCGCGGTTACAGCATA
Internal bar code:TCCTACCCGCTGCAATATTAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:519
LEAP-Seq percent confirming:85.7143
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:ACATACCAGTCTAGGCGGGT
Suggested primer 2:TTTCCCTTCGACTGGCAGTC