Insertion junction: CLIP2.029230_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.029230
Chromosome:chromosome 6
Location:1769641
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g263150 (1 of 1) PTHR21586:SF0 - PP2C-LIKE DOMAIN-CONTAINING PROTEIN CG9801 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATGTGGCCGTGTGTGCGAGCACCTGTGGCCGTGGCGTCAGTACGCAGGC
Internal bar code:ATTTTCCACTGGTGATATATGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1418
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:CACCGTCGCATGATCCATCT
Suggested primer 2:TCAAACCCGCCTTCCTTACC