Insertion junction: CLIP2.029231_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.029231
Chromosome:chromosome 6
Location:1539589
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g260950 (1 of 1) K12483 - EH domain-containing protein 1 (EHD1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCCCCCCAGTTTTGGCGACGATGCTTGACTATTGGGCCCTATTATATGA
Internal bar code:ACGAATACACTAGGTGTATTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:189
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:GACATGGACCGCTCTCTACG
Suggested primer 2:GCACAACTCCGCAGCATATG