Insertion junction: CLIP2.029235_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.029235
Chromosome:chromosome 4
Location:1498277
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g213800 (1 of 1) PTHR10825//PTHR10825:SF5 - RING FINGER DOMAIN-CONTAINING, POLYCOMB GROUP COMPONENT // E3 UBIQUITIN-PROTEIN LIGASE RING1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTAACATCAGACAGATGGACGAGGTTGGTGTCGAGGAGTTGCAGCTGTG
Internal bar code:TGGAGTTAGGGCCGGTAAGTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1198
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:CCGGTTTGCTTTGGTGAGTG
Suggested primer 2:GTCAATGGGCAGTCAAGGGA