Insertion junction: CLIP2.029240_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.029240
Chromosome:chromosome 16
Location:893277
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g648150 (1 of 6) PTHR24114//PTHR24114:SF2 - FAMILY NOT NAMED // LEUCINE-RICH REPEAT-CONTAINING PROTEIN 74 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGGCGGGCTTCGTTTTGTTGTTTTTAACACACAGACACACACACACACA
Internal bar code:CGTATGTAGCATCCAATTGCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:689
LEAP-Seq percent confirming:41.3793
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:17
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:CAAGTGTATGCGGCGACATG
Suggested primer 2:GCTGGCTACCCATGCAACTA