Insertion junction: CLIP2.029241_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.029241
Chromosome:chromosome 12
Location:4585923
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g521700 SSS6,SSS1A Soluble starch synthase IA; (1 of 5) K00703 - starch synthase (E2.4.1.21, glgA) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACATACACCCTCACACCCACACACGCACACGCGCGCACGCACACCCTCG
Internal bar code:CACTAAATAGTTTCGATGAGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:191
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGACCACAATCGCCTACC
Suggested primer 2:CACACACACACACATGCAGG