Insertion junction: CLIP2.029246_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.029246
Chromosome:chromosome 9
Location:2184233
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g395450 (1 of 9) PF01344 - Kelch motif (Kelch_1) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGTGATGGCGGCGCCGCCACCCACGTACACCAGCTCAGTCCTGCGGGTG
Internal bar code:TGTGGGATAATCCCGGGTATAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1356
LEAP-Seq percent confirming:90.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:ATGCAATCATCATGCCACGC
Suggested primer 2:CTACGCGCGTGAGATTGTTG