Insertion junction: CLIP2.029254_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.029254
Chromosome:chromosome 1
Location:5223376
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g036550 ERV14 (1 of 1) PTHR12290:SF11 - PROTEIN CORNICHON; Cornichon-like protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAACCCCATGAGTGCGCACCCGCAATTCTGTGTCCGCCCCTTATGCCACG
Internal bar code:TCTGTATTGGTGGGTTAAAGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:3216
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:59
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:59

Suggested primers for confirmation by PCR

Suggested primer 1:ACCCAATCCATGTCTGGCAG
Suggested primer 2:TAGAATGGCAGGAGGGCTCT