Insertion junction: CLIP2.029259_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.029259
Chromosome:chromosome 1
Location:1937963
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g010750 RLS10 RegA/Rls-like protein; (1 of 1) IPR000104//IPR010919 - Antifreeze protein, type I // SAND domain-like CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGTACGCCCCTCGCGACTGCAACGTCAGCACCACGACCCTGAGCGACAG
Internal bar code:GGATATCCTCCTCTGGAATGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:293
LEAP-Seq percent confirming:77.7778
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:GTTGTCATCCATGGTTGCGG
Suggested primer 2:TGTGAACCTGAACCCGTACG