Insertion junction: CLIP2.029266_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.029266
Chromosome:chromosome 3
Location:3101804
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g164350 (1 of 1) K06130 - lysophospholipase II (LYPLA2) CDS
Cre03.g800314 (1 of 77) IPR001623 - DnaJ domain 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGATGCTCGCGCGTAGCTTCCCCTTGAAGTCGAAGTTCTGCCCTTCTCG
Internal bar code:AAGCGTTGTATGCACCGGTAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1788
LEAP-Seq percent confirming:91.6667
LEAP-Seq n confirming:44
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:48

Suggested primers for confirmation by PCR

Suggested primer 1:AGACATCTGCCATGCTGCTT
Suggested primer 2:GGTTGGGAAAACAGGCGTTC