Insertion junction: CLIP2.029270_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.029270
Chromosome:chromosome 7
Location:1150030
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g320900 (1 of 1) PTHR20883//PTHR20883:SF5 - PHYTANOYL-COA DIOXYGENASE DOMAIN CONTAINING 1 // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGTCTGTGCCCGGCGAGCGTTGACCAATAGTAGGTTCTGACCGGCGGGG
Internal bar code:TCTACGAACTAGCGGTAGATCT

Confirmation - LEAP-Seq

LEAP-Seq distance:3329
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:32
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:TCTGTGTGCACATTACCCCC
Suggested primer 2:TTCAAAGTCAACGCTGCAGC