Insertion junction: CLIP2.029273_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.029273
Chromosome:chromosome 7
Location:1778109
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g325723 ADK1 Adenylate kinase; (1 of 1) PTHR23359//PTHR23359:SF85 - NUCLEOTIDE KINASE // SUBFAMILY NOT NAMED 5'UTR
Cre07.g800785 (1 of 5) PTHR30405 - TRANSPOSASE 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATAAAACAACTATGCGAGGCAGCGATGAGTGCTGTGTATAAAGAAATAA
Internal bar code:TTGTTAGGACCCTGAGTTGTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:276
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:TGCGGTGAGTTGTTTGCATG
Suggested primer 2:AAACGCCTTACCAAGAGCGA