Insertion junction: CLIP2.029282_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.029282
Chromosome:chromosome 10
Location:4788184
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g452950 TRP1 Transient receptor potential ion channel protein; (1 of 1) PTHR10117:SF46 - TRANSIENT-RECEPTOR-POTENTIAL-LIKE PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGACTTTTTCATCGGGCCCGGGCACGTAATCCCCCCCTCCCCCTCCCCC
Internal bar code:ATTAACAGACTTTGTGCACAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:379
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:TTGGCGCTACCGATATGACC
Suggested primer 2:GCAGGGAAAGGAAGGGTCTC