Insertion junction: CLIP2.029297_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.029297
Chromosome:chromosome 2
Location:923759
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g079150 (1 of 1) PF03031//PF13671 - NLI interacting factor-like phosphatase (NIF) // AAA domain (AAA_33) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGAGGACCCCGGTTGCCGGGTGCTACAGCGCCTGGGGGACCTGCTGCTG
Internal bar code:GGTATTTACATAGAATCTGCAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1107
LEAP-Seq percent confirming:92.8571
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:CCTTTCAACTGCTGTGCACC
Suggested primer 2:TACACCGCCCTCTATCACCA