Insertion junction: CLIP2.029305_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.029305
Chromosome:chromosome 2
Location:4033845
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre02.g103000 FKM3 DNA methylase in the FkbM family; (1 of 13) PF05050 - Methyltransferase FkbM domain (Methyltransf_21) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACAACTCACCTCGCGCAGGGCCGGCAACGGTGCGTCCCAGCCGCCAGAG
Internal bar code:ATGGACGAGATGTTTAAGCGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:2215
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:GCTCCAAGGACGAGATCGAG
Suggested primer 2:GGGTCCTTGGGGTCTAGGAT