Insertion junction: CLIP2.029306_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.029306
Chromosome:chromosome 1
Location:4507200
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g030800 CSN2 COP9 signalosome subunit; (1 of 1) K12176 - COP9 signalosome complex subunit 2 (COPS2, CSN2, TRIP15) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGGCGTGTTGTGTGTGACATGCCTGGCTTGGCAGGAGTCAGGGGCAGGT
Internal bar code:CTTCTTCGATTACATTATCTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1056
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:GTTCAGCAGGCAAACAGGTG
Suggested primer 2:CCTGCCGCGTATTACGTAGT