Insertion junction: CLIP2.029312_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.029312
Chromosome:chromosome 17
Location:2871679
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g718850 RFA1,RPA70A (1 of 1) PTHR23273//PTHR23273:SF12 - REPLICATION FACTOR A 1, RFA1 // REPLICATION PROTEIN A 70 KDA DNA-BINDING SUBUNIT C-RELATED; Replication protein A, 70 kDa DNA-binding subunit CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACTAGGTCCGGCGCCGCCGGCGGGCGCCGCCGCGCCGCCGGGGCCTCCA
Internal bar code:GCCGCATAAGTGACACTACACA

Confirmation - LEAP-Seq

LEAP-Seq distance:1283
LEAP-Seq percent confirming:30.303
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:23
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:CATGCAACTGGCCAGGACTA
Suggested primer 2:ACTGATGCCGGTTATGTGCA