Insertion junction: CLIP2.029314_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.029314
Chromosome:chromosome 9
Location:2019177
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g396750 CSE18 Predicted protein of CSE family; (1 of 1) IPR000601//IPR022409 - PKD domain // PKD/Chitinase domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATGCATGTACGGCTGTTGACAAGCTCATTTGCAAGTCATTCTTAATAGT
Internal bar code:CTTGATAGTTCACGGAAACCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:289
LEAP-Seq percent confirming:55.5556
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:GTCCGGTCCATGTTTAGGCA
Suggested primer 2:ACTGAGGTGATACTCGGCCT