Insertion junction: CLIP2.029321_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.029321
Chromosome:chromosome 17
Location:3611722
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g725200 (1 of 2) K05658 - ATP-binding cassette, subfamily B (MDR/TAP), member 1 (ABCB1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGCTCCACGTTCATCACGGGCTACGTCATTGGCTTCGTGAAGGGCTGGG
Internal bar code:CATTCACATAATTCACGTTGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1279
LEAP-Seq percent confirming:71.4286
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:CTGTTGGGTGCATGCAAACA
Suggested primer 2:GTGAGAATCCGAATGCGCAC