Insertion junction: CLIP2.029336_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.029336
Chromosome:chromosome 3
Location:6475006
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g193576 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGGAGCTGCTCGGTACCGTACCTTGCCGCGATCACCCCGCATGTAATTA
Internal bar code:AAATTAGAGTGTGCTATTGTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1515
LEAP-Seq percent confirming:82.7586
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:GAAGCGCCAACGATGATCAC
Suggested primer 2:CACGGTGAGATAGGGATGGC