Insertion junction: CLIP2.029340_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.029340
Chromosome:chromosome 16
Location:7737542
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g686846 (1 of 1) PTHR22797//PTHR22797:SF40 - CARD6/NUCLEOLAR PROTEIN 3 // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACACGTCTCCGGGCGGCACTCGCGCAGCAGCGCAGACGCCGCTGCCGCA
Internal bar code:GCCGTATCCGTACACCGGCTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1198
LEAP-Seq percent confirming:15.3846
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:CATCCTACACAGCCGCCTAG
Suggested primer 2:GCCAGCAATGTAAGCGTACG